EGAF00005577394 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577394
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	56311
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	122	0.21665393972758432	No Hit
GGTTTAGGTTATGTACGTAGTCTAGGCCATATGTGTTGGAGATTGAGACT	89	0.1580508248832377	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	84	0.14917156505833673	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	74	0.13141304540853474	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA	73	0.12963719344355454	No Hit
CCGCAGTACTGATCATTCTATTTCCCCCTCTATTGATCCCCACCTCCAAA	66	0.11720622968869315	No Hit
ACATACAACTACGCAAAGGCCCCAACGTTGTAGGCCCCTACGGGCTACTA	65	0.11543037772371295	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	58	0.10299941396885155	No Hit
CCTCTAGCCTAGCCGTTTACTCAATCCTCTGATCAGGGTGAGCATCAAAC	58	0.10299941396885155	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTGGAA	10	0.0022812267	211.57445	145
GCAAATA	20	8.5230204E-5	158.68083	145
TATGGTC	25	0.0010313905	84.85547	3
ATGGTCT	25	0.0010313905	84.85547	4
GAGGCAC	35	3.8583097E-5	80.81473	7
CATAAGA	30	0.0021266858	70.71289	1
ATTAGAG	45	1.3397714E-4	62.8559	3
ACCATGA	50	2.2556643E-4	56.57031	1
GCCAAAA	60	0.0066992645	52.893616	145
AATATTT	85	4.2220202E-4	49.782227	145
GGCACCG	60	5.5474654E-4	47.141926	9
ACTAAGT	60	5.5474654E-4	47.141926	8
AGAGGCA	60	5.5474654E-4	47.141926	6
TTAGAGG	70	0.0011850703	40.407364	4
TAGAGGC	75	0.001663484	37.71354	5
CATGAGC	95	1.17747244E-4	37.21731	3
ATAATAC	100	1.5921985E-4	35.356445	3
TATTGTT	105	2.1209069E-4	33.672802	4
AGGCACC	85	0.0030741496	33.276653	8
GGGAGTG	90	0.004067265	31.42795	9