EGAF00005577395 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577395
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	56311
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	117	0.2077746799026833	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	87	0.15449912095327734	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA	79	0.14029230523343575	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	68	0.12075793361865356	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	66	0.11720622968869315	No Hit
GGATTAGACTGAGCCGAATTGGTATATAGTTTAAACAAAACGAATGATTT	65	0.11543037772371295	No Hit
GGTTTAGGTTATGTACGTAGTCTAGGCCATATGTGTTGGAGATTGAGACT	63	0.11187867379375256	No Hit
GTATAGGGGTTAGTCCTTGCTATGTTATGCTTGGTTATAATTTTTCATCT	60	0.10655111789881196	No Hit
GTCTAGGCCATATGTGTTGGAGATTGAGACTAGTAGGGCTAGGCCCACCG	59	0.10477526593383175	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	57	0.10122356200387135	No Hit
CCTTTTACCCCTACCATGAGCCCTACAAACAACTAACCTGCCACTAATAG	57	0.10122356200387135	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CACATCC	20	4.248855E-4	106.06667	9
ATTAGAG	50	2.6519047E-8	84.85334	3
GTTCAGC	50	1.9935742E-6	74.13793	120-124
AGGAGTG	30	0.0021268982	70.711105	5
GTGGTCT	30	0.0021268982	70.711105	4
GAGGCAC	60	9.386167E-8	70.711105	7
CAAAGTA	50	0.002846417	65.65337	145
AGAGGCA	65	1.6336344E-7	65.2718	6
TTAGAGG	80	9.627911E-9	61.872223	4
CCACAAG	35	0.003918226	60.609524	6
AGGCACC	70	2.7275928E-7	60.609524	8
CACAAGG	35	0.003918226	60.609524	7
ACAAGGC	35	0.003918226	60.609524	8
TCCGTTG	55	0.0041523403	59.68488	145
CAGGTAA	40	0.0066468134	53.033337	9
GGCACCG	80	6.861028E-7	53.033337	9
AGCCTTA	40	0.0066468134	53.033337	6
AGTTGGT	55	3.6120065E-4	51.426266	8
CTCTAGC	55	3.6120065E-4	51.426266	2
GTATTAG	155	0.0	50.18208	1