EGAF00005577398 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577398
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	105560
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	181	0.17146646456991282	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	153	0.1449412656309208	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	146	0.13830996589617278	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	134	0.1269420234937476	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGCTTTTTGGAAAGTCATGTCA	132	0.12504736642667677	No Hit
ATATACAACTACGCAAAGGCCCCAACGTTGTAGGCCCCTACGGGCTACTA	123	0.1165214096248579	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	114	0.10799545282303903	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	109	0.1032588101553619	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	108	0.10231148162182645	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	106	0.10041682455475559	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTGCCA	45	0.0018310639	73.44884	145
GTGACTT	45	0.0018310639	73.44884	145
CTTGAGA	30	0.0020661706	71.27323	4
CCTTGAG	30	0.0020661706	71.27323	3
GAGGCAC	55	4.466734E-6	64.793846	7
ATTAGAG	60	7.4837826E-6	59.394356	3
CGCGCCA	60	0.005724654	55.08663	145
CAGACGG	40	0.0064574885	53.454914	9
GCACCGA	65	0.007856488	50.849197	145
CTCTAGC	100	5.318725E-8	49.891254	2
GTCCTCA	60	5.357208E-4	47.515484	6
AGCCTTA	60	5.357208E-4	47.515484	6
GCCTACC	80	4.1054005E-5	44.54576	8
CCTACAT	100	7.744227E-4	44.0693	145
TATGGTC	65	7.947333E-4	43.860443	3
CATGTAC	65	7.947333E-4	43.860443	3
GCATGTA	65	7.947333E-4	43.860443	2
ATGGTCT	70	0.0011445048	40.727554	4
GCTGTGT	110	0.0012378718	40.063004	145
AGAGGCA	90	8.223819E-5	39.596237	6