EGAF00005577399 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577399
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	105560
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	184	0.17430845017051913	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	152	0.14399393709738537	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	131	0.12410003789314135	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	126	0.11936339522546419	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	116	0.10989010989010989	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	115	0.10894278135657445	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	110	0.1042061386888973	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGCTTTTTGGAAAGTCATGTCA	108	0.10231148162182645	No Hit
GGATTAGACTGAGCCGAATTGGTATATAGTTTAAACAAAACGAATGATTT	107	0.10136415308829101	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTGCCA	25	1.7916314E-4	131.79971	145
AATATAC	40	7.226945E-5	71.261375	3
CTCTCCG	40	7.226945E-5	71.261375	9
CCAAGTA	30	0.002067534	71.26137	2
CACATTC	45	1.2947552E-4	63.343445	9
CCCTGTC	35	0.0038089936	61.08118	9
ACTGATC	40	0.006461736	53.446033	8
ACAGGGT	40	0.006461736	53.446033	8
TACTGAT	40	0.006461736	53.446033	7
CATCCGG	85	3.5286648E-4	51.68616	145
TATGCGA	65	0.007953216	50.692192	145
ACACATT	65	7.953844E-4	43.853153	8
CGGATGC	65	7.953844E-4	43.853153	9
GTACGGA	65	7.953844E-4	43.853153	6
ATGGAGT	70	0.0011454409	40.720787	6
GCGTTAT	70	0.0011454409	40.720787	1
CACACAT	70	0.0011454409	40.720787	7
TTGTATA	75	0.0016079094	38.006065	2
TGTATAT	75	0.0016079094	38.006065	3
CGTTATG	75	0.0016079094	38.006065	2