FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005577400

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005577400
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length35-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGGTTACCCAAGGCACCCCTCTGACATCCGGCCTGCTTCTTCTCACATGA15.0No Hit
GTGGCTGGCAGTAATGTACGAAATACATAGCGGTTGTTGATGGGTGAGTC15.0No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGA15.0No Hit
AACTAGGAATAGCCCCCTTTCACTTCTGAGTCCCAGAGGTTACCCAAGGC15.0No Hit
ATTATGCTTGGTTATAATTTTTCATCTTTCCCTTGCGGTACTATATCTAT15.0No Hit
ATCATATTCATCGGCGTAAATCTAACTTTCTTCCCACAACACTTTCTCGG15.0No Hit
GTCCGTGGGCGATTATGAGAATGACTGCGCCGGTGAAGCTTCAGGGGGTT15.0No Hit
CCCCTGGCCCAACCCGTCATCTACTCTACCATCTTTGCAGGCACACTCAT15.0No Hit
TTGTAGATGTGGTTTGACTATTTCTGTATGTCTCCATCTATTGATGAGGG15.0No Hit
AAGGTGGATTTAGCAGTAAACTGAGAGTAGAGTGCTTAGATGAACAGGGC15.0No Hit
GCCATCCCCTTATGAGCGGGCGCAGTGATTATAGGCTTTCGCTCTAAGAT15.0No Hit
GCTCTTAGTAAGATTACACATGCAAGCATCCCCGTTC15.0No Hit
GGTAAATATGTAGAGGGAGTATAGGGCTGTGACTAGTATGTTGAGTCCTGTAAGTAGGAGAGTGATATTT15.0No Hit
ACATTAATCAGTTCTTCAAATATCTACTCATTTTCCTAATTACCATGCTA15.0No Hit
ATTCTCTGTTCTTTCATGGGGAAGCAGATTTGGGTACCACCCAAG15.0No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN15.0No Hit
ACAGTACCATAAATACTTGACTACCTGTAGTACATAAAAACTCAACCCAC15.0No Hit
CCTCTTTACGGACTCCACTTATGACTCCCTAAAGCCCATGTCGAAGCCCC15.0No Hit
GTAGTATATCCACAGACAACCATCATTTACCCTAAATAAATTAAATAAAC15.0No Hit
CACACCACCTGTCCAAAAAGGCCTTCGATACGGGATAATCCTATTTATTA15.0No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)