EGAF00005577410 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577410
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	53162
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	88	0.16553177081373913	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	83	0.1561265565629585	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	80	0.15048342801249012	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	78	0.14672134231217787	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	74	0.13919717091155337	No Hit
GCCCTACTCCACTCAAGCACTATAGTTGTAGCAGGAATCTTCTTACTCAT	72	0.13543508521124112	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	69	0.12979195666077273	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	68	0.12791091381061662	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	67	0.12602987096046048	No Hit
GTATAGGGCTGTGACTAGTATGTTGAGTCCTGTAAGTAGGAGGGTGATAT	66	0.12414882811030437	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	62	0.11662465670967985	No Hit
TCCTAACCCTACTCCTAATCACATAACCTATTCCCCCGAGCAATCTCAAT	60	0.1128625710093676	No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC	56	0.10533839960874308	No Hit
GAGTAGGGCTGAGACTGGGGTGGGGCCTTCTATGGCTGAGGGGAGTCAGG	56	0.10533839960874308	No Hit
GCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCAC	55	0.10345735675858696	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	55	0.10345735675858696	No Hit
ACCCTGGGGTTAGTATAGCTTAGTTAAACTTTCGTTTATTGCTAAAGGTT	54	0.10157631390843083	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTAGTCG	15	0.0068319757	146.60785	145
TAGCGTG	10	0.0076766373	141.07547	9
ACTCGCA	10	0.0076766373	141.07547	6
TACTCGC	10	0.0076766373	141.07547	5
CTTTGCC	35	3.2096068E-7	100.76819	4
TGCCGCC	35	3.2096068E-7	100.76819	7
AGACCAT	25	0.0010412653	84.64529	5
TGACTTT	60	6.221719E-5	73.303925	145
GACCATA	30	0.0021470194	70.537735	6
TCTTTGC	50	2.6791713E-6	70.537735	3
CCGGTCT	30	0.0021470194	70.537735	9
GGATTAC	30	0.0021470194	70.537735	1
GCTAAAC	30	0.0021470194	70.537735	3
TCCGGTC	30	0.0021470194	70.537735	8
GACAGAC	35	0.0039552455	60.460915	7
CATTGGG	35	0.0039552455	60.460915	1
ATTGGGA	35	0.0039552455	60.460915	2
TGGGACA	35	0.0039552455	60.460915	4
GGACAGA	35	0.0039552455	60.460915	6
ACCTTCA	35	0.0039552455	60.460915	7