EGAF00005577416 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577416
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	56513
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	92	0.1627944012881992	No Hit
GTCCTAGGCCTACCCGCCGCAGTACTGATCATTCTATTTCCCCCTCTATT	77	0.1362518358607754	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAGAGTCATGTCA	73	0.1291738184134624	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	71	0.1256348096898059	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	69	0.12209580096614939	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	69	0.12209580096614939	No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC	69	0.12209580096614939	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	69	0.12209580096614939	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	66	0.11678728788066463	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	65	0.11501778351883639	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	64	0.11324827915700812	No Hit
GCGGTAGGCCTAGCCCTACTAGTCTCAATCTCCAACACATATGGCCTAGA	59	0.10440075734786686	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTTGCC	10	0.007703987	140.91592	4
AGCGCTA	40	8.037305E-6	110.73365	145
CGAATCA	35	6.588968E-4	94.91456	145
AGCCTTA	30	1.828151E-5	93.943954	6
CTATGGA	25	0.0010463165	84.54955	4
CCTATGG	25	0.0010463165	84.54955	3
TTAGATG	40	0.0011200225	83.05024	145
GAGCTTT	35	0.00397437	60.39254	9
CTATAAC	35	0.00397437	60.39254	2
GCCTTAC	50	2.2963689E-4	56.36637	7
AAGGAAG	60	0.005589341	55.36683	145
AAGCCCA	40	0.0067419186	52.84347	6
ATCACAC	75	2.9834686E-5	46.971973	1
TCACACC	70	0.0012063526	40.261692	2
GCCTACA	75	0.0016933217	37.57758	2
ATAACCA	80	0.0023245167	35.22898	4
GCTAGAG	110	2.8468072E-4	32.026344	2
ATGTACT	95	0.0053932695	29.66651	4
TATAACC	95	0.0053932695	29.66651	3
GGTAGGC	95	0.0053932695	29.66651	3