EGAF00005577424 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577424
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	77308
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	107	0.13840740932374399	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	103	0.13323330056397786	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	94	0.12159155585450407	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	87	0.11253686552491332	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	86	0.1112433383349718	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	83	0.1073627567651472	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	79	0.10218864800538108	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	79	0.10218864800538108	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGGCGG	30	4.0944899E-4	107.04475	145
TTTACAC	45	1.2834555E-4	63.43392	3
TTAGAGT	35	0.0037836526	61.168427	4
AAGGAGC	35	0.0037836526	61.168427	6
AATGTGT	35	0.0037836526	61.168427	6
GTTATAG	50	2.1609507E-4	57.09053	2
TATGCGA	60	0.006406692	53.522373	145
GAGCTTT	85	3.996718E-4	50.373997	145
AAAGGAG	75	2.77617E-5	47.575443	5
GCTGACT	70	0.0011355202	40.77895	8
TACCGCA	70	0.0011355202	40.77895	7
CCTATAC	145	2.1709639E-8	39.37278	3
CACGACA	110	0.0014229144	38.92536	145
ACCATGA	75	0.0015940042	38.060356	1
CTCTAGC	75	0.0015940042	38.060356	2
ACCCTTC	95	1.11956564E-4	37.559563	6
TTACACC	80	0.002188326	35.681583	4
GTAGTCC	100	1.5139666E-4	35.681583	8
CACCAAC	80	0.002188326	35.681583	7
GACATCA	130	0.0032301338	32.936844	145