EGAF00005577425 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577425
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	77308
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	107	0.13840740932374399	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	92	0.119004501474621	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	90	0.11641744709473792	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	84	0.10865628395508872	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	84	0.10865628395508872	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGCTTTTTGGAAAGTCATGTCA	82	0.10606922957520568	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	81	0.10477570238526412	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	79	0.10218864800538108	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	78	0.10089512081543953	No Hit
GGATTAGACTGAGCCGAATTGGTATATAGTTTAAACAAAACGAATGATTT	78	0.10089512081543953	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCGATG	45	0.001858109	73.149216	145
CTGACCC	30	0.00205294	71.37029	4
TACACAC	30	0.00205294	71.37029	3
GATCACC	35	0.0037821545	61.17454	7
CCTGACC	35	0.0037821545	61.17454	3
CCAGCCC	40	0.006416285	53.52772	8
AGAATCG	85	3.53688E-4	51.634743	145
TTACCTT	95	6.121644E-4	46.199505	145
CTCTAAC	80	4.0622734E-5	44.606434	1
CTATGCT	100	3.0094743E-6	42.822178	9
CACACCG	85	5.8096513E-5	41.98253	5
TCTAGCA	75	0.0015932219	38.06416	3
ACACCGC	95	1.1189076E-4	37.563313	6
TTATACC	120	1.0524E-5	35.685146	4
CTAACAC	125	1.3919962E-5	34.257744	3
TGAGAGT	130	0.0028609287	33.76118	145
TACGAGT	85	0.0029445796	33.586025	4
CAACTAC	85	0.0029445796	33.586025	6
TATACAA	85	0.0029445796	33.586025	2
GTGCAGG	110	2.6487123E-4	32.441044	9