EGAF00005577426 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577426
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	86441
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	118	0.13650929535752712	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	101	0.11684270195856133	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	96	0.11105840978239492	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	96	0.11105840978239492	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA	95	0.10990155134716165	No Hit
GCCCTACTCCACTCAAGCACTATAGTTGTAGCAGGAATCTTCTTACTCAT	94	0.10874469291192836	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	90	0.10411725917099525	No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC	89	0.10296040073576196	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	89	0.10296040073576196	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	88	0.10180354230052868	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	87	0.1006466838652954	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATGCGA	20	7.457463E-5	164.19658	145
CAATCAG	40	0.001175957	82.09829	145
CGAATCA	50	0.0028501856	65.67863	145
AATCCTT	35	0.0038326245	60.976437	5
ACCTACA	40	0.0065017752	53.354385	2
AGCCTTA	55	3.5165602E-4	51.737583	6
ATATAGC	85	5.927837E-5	41.846577	6
GCCTTAC	70	0.0011539884	40.65096	7
GTTAGTC	70	0.0011539884	40.65096	9
TCTAGCA	105	4.3098516E-6	40.65096	3
TATTGCG	70	0.0011539884	40.65096	9
TTGTATA	90	8.30302E-5	39.521763	2
AGGGTTG	145	2.237357E-8	39.249203	5
GGTCAGG	75	0.0016198966	37.940895	1
TATACAA	75	0.0016198966	37.940895	2
CACCTTG	85	0.0029937553	33.47726	6
TTGATTC	150	1.2965265E-6	33.198284	9
AAGTGTA	140	0.0041651395	31.275536	145
CTATATC	95	0.0051603857	29.953337	2
TGTATAT	95	0.0051603857	29.953337	3