EGAF00005577427 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577427
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	86441
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	171	0.19782279242489095	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA	104	0.12031327726426118	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	100	0.11568584352332806	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	97	0.1122152682176282	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	96	0.11105840978239492	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	95	0.10990155134716165	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	95	0.10990155134716165	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGGAGC	10	0.0074960073	142.2552	3
CGAATCA	30	3.7770724E-4	109.252	145
CCTTACG	25	0.0010095565	85.35312	1
AGTGCGG	25	0.0010095565	85.35312	8
ACGAGTG	25	0.0010095565	85.35312	5
CCGTGCG	40	7.287049E-5	71.1276	9
TCCGTGC	40	7.287049E-5	71.1276	8
GTGCGGC	30	0.0020817188	71.1276	9
AGCATGC	35	0.0038350953	60.96652	2
TATAGTC	35	0.0038350953	60.96652	5
GATAAGC	40	0.0065059625	53.3457	3
GCATGCC	40	0.0065059625	53.3457	3
AAGCTCT	40	0.0065059625	53.3457	6
CTCCAGT	65	0.008114252	50.424	145
TGTAGTC	60	5.406021E-4	47.418404	3
TATCGTG	60	5.406021E-4	47.418404	5
CCTTCTG	60	5.406021E-4	47.418404	9
GTAAGAG	95	2.1676988E-6	44.922695	9
ATTAGAG	65	8.019672E-4	43.770836	3
GAGGCAC	65	8.019672E-4	43.770836	7