EGAF00005577437 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577437
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	85588
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	133	0.15539561620787962	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	128	0.14955367574893677	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	120	0.14020657101462822	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	115	0.13436463055568537	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	114	0.1331962424638968	No Hit
GTATAGGGCTGTGACTAGTATGTTGAGTCCTGTGAGTAGGAGAGTGATAT	105	0.1226807496377997	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	99	0.11567042108706828	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	97	0.11333364490349114	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	91	0.10632331635275973	No Hit
TCCTAACCCTACTCCTAATCACATAACCTATTCCCCCGAGCAATCTCAAT	87	0.10164976398560545	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAATCA	40	0.0011523867	82.515976	145
CATCTCT	35	3.7906E-5	81.15256	9
ATTGTGG	30	0.0020955254	71.008484	8
TATATCG	30	0.0020955254	71.008484	5
CTAGATA	35	0.0038604946	60.864418	4
CCTAGAT	35	0.0038604946	60.864418	3
TCACCGG	60	0.0057501574	55.01065	145
ATTAGAG	65	1.2273302E-5	54.621914	3
ACTCTTG	40	0.0065489896	53.256363	8
GTAGCAC	40	0.0065489896	53.256363	3
CCTAACG	65	0.007891468	50.779064	145
GAGGCAC	70	1.903101E-5	50.72035	7
GGGCTAA	60	5.4505386E-4	47.33899	1
TTAGCCA	65	8.085636E-4	43.69753	4
TTAGAGG	130	5.5241988E-5	42.315887	145
TGTCATC	70	0.0011644004	40.57628	7
TTGTACT	70	0.0011644004	40.57628	4
TATGTCA	70	0.0011644004	40.57628	5
CTCTAGC	70	0.0011644004	40.57628	2
AGGCACC	90	8.3926905E-5	39.449158	8