EGAF00005577445 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577445
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	121169
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	181	0.14937814127375812	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	174	0.14360108608637523	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	151	0.12461933332783139	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	150	0.12379403972963383	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	146	0.12049286533684359	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	139	0.11471581014946067	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	134	0.11058934215847288	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGCTTTTTGGAAAGTCATGTCA	131	0.1081134613638802	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	126	0.10398699337289241	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	124	0.10233640617649728	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	123	0.10151111257829973	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCACCGA	50	0.0029162518	65.32528	145
CCGGTCT	55	4.3964174E-6	64.977104	9
GGATTAC	55	4.3964174E-6	64.977104	1
TCCGGTC	55	4.3964174E-6	64.977104	8
CGAATCA	55	0.0042540897	59.386623	145
TACTCCG	65	1.1836286E-5	54.980625	5
ACTCCGG	65	1.1836286E-5	54.980625	6
TCACCGG	80	2.734122E-4	54.43774	145
AGAAAGG	80	2.734122E-4	54.43774	145
CAGGTAA	55	3.4413286E-4	51.98168	9
AAAGCTG	55	3.4413286E-4	51.98168	5
ACCGTTA	70	1.8353981E-5	51.053436	8
TACCGTT	70	1.8353981E-5	51.053436	7
TAGTCAA	130	1.0004624E-6	50.250217	145
TACACTA	90	4.889596E-4	48.3891	145
CTTGTAC	60	5.2862446E-4	47.649876	3
TTGTACT	60	5.2862446E-4	47.649876	4
AAGCTGG	60	5.2862446E-4	47.649876	6
ATATACA	110	1.1031261E-7	45.48397	1
CCATAGC	65	7.8421744E-4	43.9845	9