FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005577448

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005577448
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8918
Sequences flagged as poor quality0
Sequence length35-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC150.16819914779098452No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG150.16819914779098452No Hit
TCCTTGTACTATCCCTATGAGGCATAATTATAACAAGCTCCATCTGCCTA140.15698587127158556No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG140.15698587127158556No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT130.1457725947521866No Hit
CCCATACATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAG130.1457725947521866No Hit
GTACAATATTCATGGTGGCTGGCAGTAATGTACGAAATACATAGCGGTTG120.13455931823278763No Hit
ATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACG120.13455931823278763No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN120.13455931823278763No Hit
AAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTC110.12334604171338864No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA100.1121327651939897No Hit
GTCCCACCCTCACACGATTCTTTACCTTTCACTTCATCTTGCCCTTCATT100.1121327651939897No Hit
GTATGAATGGCTCCACGAGGGTTCAGCTGTCTCTTACTTTTAACCAGTGA100.1121327651939897No Hit
ATTTATATCATCCTAACTACTACCGCATTCCTACTACTCAACTTAAACTC100.1121327651939897No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG100.1121327651939897No Hit
CATCAAAACCCTGCCCCCATGCTTACAAGCAAGCACAGCAATCAACCTTC100.1121327651939897No Hit
GTCCTAGGCCTACCCGCCGCAGTACTGATCATTCTATTTCCCCCTCTATT100.1121327651939897No Hit
TCCTAATACCAACTATCTCCCTAATTGAAAACAAAATACTCAAATGGGCC90.1009194886745907No Hit
AATTAATCCCCTGGCCCAACCCGTCATCTACTCTACCATCTTTGCAGGCA90.1009194886745907No Hit
TCTGAATACACAATAGCTAAGACCCAAACTGGGATTAGATACCCCACTAT90.1009194886745907No Hit
GTATAATACGCCTCACACTCATTCTCAACCCCCTGACAAAACACATAGCC90.1009194886745907No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)