EGAF00005577453 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577453
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	111516
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	158	0.14168370458050863	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	151	0.1354065784282076	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	149	0.13361311381326446	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	144	0.1291294522759066	No Hit
GTCCTAGGCCTACCCGCCGCAGTACTGATCATTCTATTTCCCCCTCTATT	144	0.1291294522759066	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	135	0.12105886150866244	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	135	0.12105886150866244	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	134	0.12016212920119085	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	130	0.11657519997130457	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	130	0.11657519997130457	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	122	0.10940134151153197	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	121	0.1085046092040604	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAGAGTCATGTCA	121	0.1085046092040604	No Hit
GCCCTACTCCACTCAAGCACTATAGTTGTAGCAGGAGTCTTCTTACTCAT	118	0.10581441228164569	No Hit
ACCCTGGGGTTAGTATAGCTTAGTTAAACTTTCGTTTATTGCTAAAGGTT	115	0.10312421535923096	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCCCCCG	10	0.007554598	141.9035	4
CTTTGCC	10	0.007554598	141.9035	4
GTTATAG	10	0.007554598	141.9035	2
GCACACA	35	7.136274E-4	93.12547	145
GTCATAA	70	1.524857E-6	77.60456	145
GGCATCC	35	0.0038758258	60.815784	8
TGCAGAC	35	0.0038758258	60.815784	2
CTCTAGC	150	0.0	56.761402	2
ATACAGG	90	2.4037945E-8	55.184696	6
GTACAAG	65	1.2356035E-5	54.578266	1
GTGCAGA	40	0.0065749465	53.213814	1
GCGGGTA	40	0.0065749465	53.213814	9
ACCAGCC	40	0.0065749465	53.213814	8
GGGCATC	40	0.0065749465	53.213814	7
CACCAGC	40	0.0065749465	53.213814	7
TACAGGT	85	1.0273961E-6	50.08359	7
ATTAGAG	100	5.515176E-8	49.666225	3
GAGGCAC	100	5.515176E-8	49.666225	7
GCATAAG	90	1.5234837E-6	47.30117	1
TACATAC	60	5.479273E-4	47.30117	3