FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005577457

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005577457
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8750
Sequences flagged as poor quality0
Sequence length35-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN390.44571428571428573No Hit
GTATAGGGGTTAGTCCTTGCTATGTTATGCTTGGTTATAATTTTTCATCT170.19428571428571428No Hit
ACACACTTCAGTAAGTATGCTCGCCTGTAATATTGAACGTAGGTGCGATA90.10285714285714286No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)