EGAF00005577461 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577461
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	53906
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	104	0.1929284309724335	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	79	0.14655140429636776	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	78	0.1446963232293251	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA	66	0.12243535042481357	No Hit
GGTTTAGGTTATGTACGTAGTCTAGGCCATATGTGTTGGAGATTGAGACT	63	0.11687010722368568	No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC	63	0.11687010722368568	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	60	0.11130486402255778	No Hit
GTTGTATATAGCCTAGAATTTTTCGTTCGGTAAGCATTAGGAATGCCATT	57	0.1057396208214299	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	55	0.10202945868734464	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	55	0.10202945868734464	No Hit
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCGTTGAACA	55	0.10202945868734464	No Hit
GGATTAGACTGAGCCGAATTGGTATATAGTTTAAACAAAACGAATGATTT	54	0.10017437762030201	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGGCTCG	10	0.0075903772	141.61137	4
GCCTTGG	20	4.2252493E-4	106.20853	1
CCGTGCG	20	4.2252493E-4	106.20853	9
TCCGTGC	25	0.0010257714	84.96682	8
CTGCGTT	30	0.0021151174	70.80568	9
TGTAGTC	30	0.0021151174	70.80568	3
AGCCGCA	50	0.0032148173	63.665787	145
GCTCTAG	35	0.003896556	60.690586	1
GGCTGGG	35	0.003896556	60.690586	7
GTATGTG	50	2.2401541E-4	56.644547	1
GTGCCTG	65	1.24200105E-5	54.46591	5
GAGGAGC	40	0.0066101085	53.104263	6
ATCCGTC	60	5.50942E-4	47.20379	7
TCCGTCC	60	5.50942E-4	47.20379	8
TAGTCCG	60	5.50942E-4	47.20379	5
TTTTGGA	90	5.5099244E-4	47.15984	145
TGGGAGT	70	0.0011769636	40.460392	4
GTAGTCC	70	0.0011769636	40.460392	4
GTAATAC	85	0.0030532011	33.320324	3
TATACTC	85	0.0030532011	33.320324	5