EGAF00005577465 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577465
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	57609
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	96	0.16664062906837473	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	90	0.1562255897516013	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	88	0.15275390997934352	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	81	0.14060303077644118	No Hit
GCCCTACTCCACTCAAGCACTATAGTTGTAGCAGGAATCTTCTTACTCAT	81	0.14060303077644118	No Hit
GCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCAC	79	0.13713135100418336	No Hit
GTATAGGGCTGTGACTAGTATGTTGAGTCCTGTAAGTAGGAGAGTGATAT	78	0.13539551111805448	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	76	0.13192383134579666	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	73	0.12671631168740996	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	70	0.12150879202902323	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	69	0.11977295214289435	No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC	68	0.11803711225676543	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	67	0.11630127237063653	No Hit
ACTATAACCACCCTAACCCTAACTTCCCTAATTCCCCCCATCCTTACCAC	62	0.10762207293999201	No Hit
GTTCCTAGCCATGCACTACTCACCAGACGCCTCAACCGCCTTTTCATCAA	62	0.10762207293999201	No Hit
ACCCTGGGGTTAGTATAGCTTAGTTAAACTTTCGTTTATTGCTAAAGGTT	60	0.10415039316773421	No Hit
GAGTAGGGCTGAGACTGGGGTGGGGCCTTCTATGGCTGAGGGGAGTCAGG	60	0.10415039316773421	No Hit
GGCCTAGCCCTACTAGTCTCAATCTCCAACACATATGGCCTAGACTACGT	58	0.1006787133954764	No Hit
ATCTATCACCCTATAGAAGAACTAATGTTAGTATAAGTAACATGAAAACA	58	0.1006787133954764	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTCTGG	10	0.007528031	142.01132	1
CTGGCCA	10	0.007528031	142.01132	4
TAATGCA	35	6.814948E-4	94.11901	145
CCAGACT	25	0.0010147139	85.206795	9
AGGCCAG	25	0.0010147139	85.206795	6
CCGTGCG	45	1.3787012E-6	78.89517	9
GGCCAGA	30	0.0020923465	71.00566	7
GCCAGAC	30	0.0020923465	71.00566	8
TTGTCGT	50	0.0028077315	65.883316	145
CGCGGCC	50	2.2104768E-4	56.80453	7
GCGGCCG	50	2.2104768E-4	56.80453	8
TGTAGTC	50	2.2104768E-4	56.80453	3
CCGCGGC	50	2.2104768E-4	56.80453	6
GTTATAG	50	2.2104768E-4	56.80453	2
TCTAGTG	40	0.0065391376	53.254246	2
TTGAGAG	40	0.0065391376	53.254246	3
CTAGTGA	40	0.0065391376	53.254246	3
TCCACTC	40	0.0065391376	53.254246	8
CCGCAAG	40	0.0065391376	53.254246	9
CGGCCGT	55	3.5392912E-4	51.64048	9