EGAF00005577473 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577473
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	119028
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	195	0.163826998689384	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	168	0.14114326040931546	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA	153	0.12854118358705516	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	147	0.12350035285815103	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	142	0.11929966058406426	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	141	0.1184595221292469	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	138	0.11593910676479482	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	136	0.11425882985516013	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	135	0.11341869140034277	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	133	0.11173841449070807	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	126	0.1058574453069866	No Hit
GGTTTAGGTTATGTACGTAGTCTAGGCCATATGTGTTGGAGATTGAGACT	122	0.10249689148771716	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCACCGA	50	2.9426421E-5	85.39546	145
TCAGAGT	55	4.7207708E-5	77.63224	145
GCTGAGC	40	7.205028E-5	71.312584	9
TTAGGTG	60	7.26554E-5	71.16289	145
GTTTCGT	50	0.0031538901	64.0466	145
GTTATAG	45	1.2908319E-4	63.38896	2
GATGCCC	40	0.0064454027	53.484436	8
CCACGAC	80	6.5334643E-7	53.484436	9
CGCCCTA	40	0.0064454027	53.484436	5
GCTGTAT	60	0.00649128	53.372166	145
GTCATAA	130	1.1465418E-6	49.266613	145
AGCGCTA	65	0.008907558	49.266613	145
AGCCTTA	75	2.7970504E-5	47.541718	6
CCGTGCG	80	4.0951905E-5	44.570362	9
ATTAGAG	65	7.9298264E-4	43.884663	3
GTGAGTC	65	7.9298264E-4	43.884663	9
TATACCG	65	7.9298264E-4	43.884663	6
GAGGCAC	65	7.9298264E-4	43.884663	7
GCCTTAC	85	5.8566562E-5	41.948574	7
GAAGAGT	70	0.0011419853	40.750046	4