EGAF00005577475 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577475
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	108994
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	210	0.1926711562104336	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA	150	0.137622254436024	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	133	0.12202506559994128	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	124	0.11376773033377983	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	121	0.11101528524505935	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	117	0.10734535846009872	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	116	0.10642787676385856	No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC	116	0.10642787676385856	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	115	0.1055103950676184	No Hit
GTGTATGAGTTGGTCGTAGCGGAATCGGGGGTATGCTGTTCGAATTCATA	112	0.10275794997889791	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	111	0.10184046828265778	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	109	0.10000550489017744	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTGACCA	10	0.0076843323	141.09604	4
CACATCG	35	3.919711E-5	80.62631	7
AGCGCTA	55	4.128483E-5	79.74675	145
GCGGGTA	30	0.0021518855	70.54803	9
CATCGGA	30	0.0021518855	70.54803	9
TTCCCTT	50	0.0028338542	65.79107	145
ACCGCCC	65	1.6746162E-7	65.121254	8
TACACAC	45	1.3610217E-4	62.709354	3
GCAGCTC	35	0.0039641694	60.469734	8
TGCAGCT	35	0.0039641694	60.469734	7
TTTATGA	55	0.004134005	59.810062	145
GTACACA	50	2.2913818E-4	56.43842	2
CGTACAC	50	2.2913818E-4	56.43842	1
AGCCTTA	50	2.2913818E-4	56.43842	6
TACTGAT	40	0.0067246	52.91102	7
CTAGCCT	115	3.1195668E-9	49.076885	4
GGCACAG	60	5.6350103E-4	47.032017	7
TCTGGCC	65	8.3589455E-4	43.41417	3
TACACAT	65	8.3589455E-4	43.41417	5
CTCTAGC	135	1.2872988E-8	41.806236	2