FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005577491

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005577491
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences128142
Sequences flagged as poor quality0
Sequence length35-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC3000.234115278363066No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT2260.1763668430335097No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT2150.16778261616019727No Hit
GTTGTATATAGCCTAGAATTTTTCGTTCGGTAAGCATTAGGAATGCCATT1820.14202993554026003No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA1780.13890839849541914No Hit
GGTTTAGGTTATGTACGTAGTCTAGGCCATATGTGTTGGAGATTGAGACT1690.13188494014452717No Hit
CTCCTAGCCTTACTACTAATAATCATTACATTTTGACTACCACAACTCAA1680.13110455588331696No Hit
GTCTAGGCCATATGTGTTGGAGATTGAGACTAGTAGGGCTAGGCCCACCG1620.12642225031605564No Hit
GTGTATGAGTTGGTCGTAGCGGAATCGGGGGTATGCTGTTCGAATTCATA1470.11471648639790233No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT1460.1139361021366921No Hit
ATATACAACTACGCAAAGGCCCCAACGTTGTAGGCCCCTACGGGCTACTA1390.10847341230822057No Hit
CCTCTAGCCTAGCCGTTTACTCAATTCTCTGATCAGGGTGAGCATCAAAC1390.10847341230822057No Hit
GCCTAGGATTGTGGGGGCAATGAATGAAGCGAACAGATTTTCGTTCATTT1360.10613225952458992No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGA1350.10535187526337969No Hit
GGATTAGACTGAGCCGAATTGGTATATAGTTTAAACAAAACGAATGATTT1330.10379110674095926No Hit
CCTTTTACCCCTACCATGAGCCCTACAAACAACTAACCTGCCACTAATAG1310.10223033821853882No Hit
GGGGTATGCTGTTCGAATTCATAAGAACAGGGAGGTCAGAAGTAGGGTCT1300.10144995395732859No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)