EGAF00005577495 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577495
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	59247
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	115	0.19410265498675036	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	103	0.17384846490117642	No Hit
ATATTATGCTTGGTTATAATTTTTCATCTTTCCCTTGCGGTACTATATCT	88	0.148530727294209	No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG	84	0.14177933059901768	No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG	81	0.13671578307762416	No Hit
GTACTATATCTATTGCGCCAGGTTTCAATTTCTATCGCCTATACTTTATT	77	0.12996438638243288	No Hit
CATTTATATAGAGGAGACAAGTCGTAACATGGTAAGTGTACTGGAAAGTG	68	0.1147737438182524	No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA	61	0.10295879960166761	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGCCAAA	15	0.0038104537	178.16136	145
ACGCAGG	30	1.6859264E-4	133.62102	145
GAGCAGA	20	0.009007024	133.62102	145
CATTGGG	25	0.0015241363	76.911354	1
ATTGGGA	25	0.0015241363	76.911354	2
GACAGAC	30	0.0031408807	64.0928	7
TGGGACA	30	0.0031408807	64.0928	4
GGACAGA	30	0.0031408807	64.0928	6
TCCTATA	35	0.005782848	54.936684	2
GGGACAG	35	0.005782848	54.936684	5
TATAGGA	40	0.009804232	48.069595	2
ATATAGA	70	0.0019217106	36.62446	6
CATTTAT	70	0.0019217106	36.62446	1
ACAGACC	90	1.5283193E-4	35.60711	8
ATAGGAT	120	2.1888274E-5	32.0464	3
TGAAGGG	80	0.0036986251	32.0464	8
ATAGAGG	100	2.837888E-4	32.0464	8
TTATATA	80	0.0036986251	32.0464	4
TAGAGGA	110	4.961231E-4	29.133087	9
TATAGAG	90	0.006579569	28.48569	7