EGAF00005577499 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577499
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	62959
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	117	0.1858352260995251	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	87	0.1381851681252879	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	80	0.12706682126463253	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA	74	0.1175368096697851	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	72	0.11436013913816928	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	70	0.11118346860655348	No Hit
ATATACAACTACGCAAAGGCCCCAACGTTGTAGGCCCCTACGGGCTACTA	70	0.11118346860655348	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	69	0.10959513334074557	No Hit
CCTCTAGCCTAGCCGTTTACTCAATCCTCTGATCAGGGTGAGCATCAAAC	69	0.10959513334074557	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	67	0.10641846280912974	No Hit
GTTGTATATAGCCTAGAATTTTTCGTTCGGTAAGCATTAGGAATGCCATT	67	0.10641846280912974	No Hit
GTGTATGAGTTGGTCGTAGCGGAATCGGGGGTATGCTGTTCGAATTCATA	67	0.10641846280912974	No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC	64	0.10165345701170603	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	63	0.10006512174589813	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGAGCCG	40	0.0011480252	82.55495	145
CCGTGCG	30	0.0020882268	71.04889	9
TCCGTGC	30	0.0020882268	71.04889	8
ATTACTT	35	0.0038470814	60.899044	8
CTTGGCC	35	0.0038470814	60.899044	3
GCATTAC	35	0.0038470814	60.899044	6
AGGATAT	55	0.0040593585	60.039967	145
AGAATCG	55	0.0040593585	60.039967	145
AACTGTT	60	0.005728538	55.03664	145
CCGGTCG	40	0.006526286	53.286663	9
TGTAGTC	55	3.5312588E-4	51.671917	3
GAGGCAC	55	3.5312588E-4	51.671917	7
ATTAGAG	60	5.424256E-4	47.36593	3
GGCTATA	60	5.424256E-4	47.36593	1
GTCCGTG	80	4.163159E-5	44.405552	7
ATAGCAA	65	8.046726E-4	43.72239	5
ACTATGC	75	0.0016266599	37.892742	3
CAATAAA	75	0.0016266599	37.892742	9
TAGTCCG	80	0.00223311	35.52444	5
GTAGTCC	80	0.00223311	35.52444	4