EGAF00005577505 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577505
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	136723
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	207	0.15140100787724084	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	178	0.130190238657724	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	171	0.12507039781163373	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	170	0.12433899197647799	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	156	0.11409931028429744	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	155	0.11336790444914169	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	149	0.10897946943820719	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	148	0.10824806360305143	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	145	0.10605384609758417	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	140	0.1023968169218054	No Hit
GGTTTAGGTTATGTACGTAGTCTAGGCCATATGTGTTGGAGATTGAGACT	139	0.10166541108664964	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	138	0.10093400525149389	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTGGCCA	10	0.0074139163	142.81032	9
CGAAGTC	10	0.0074139163	142.81032	5
ACACAAG	35	7.44915E-4	92.144035	145
CATCTAT	40	0.0012660881	80.62603	145
CTTGGAA	55	4.8517904E-8	77.896545	9
GGTACAT	30	0.002052367	71.40517	1
CCTTGGA	60	8.866846E-8	71.40517	8
GATCTGT	40	7.162692E-5	71.40516	1
CCAATCT	35	0.0037810877	61.204422	9
CACCAGC	35	0.0037810877	61.204422	7
ACTATCG	50	2.1606014E-4	57.12413	8
GAGACCA	50	2.1606014E-4	57.12413	9
CGAATCA	60	0.006315229	53.750694	145
CATAGTT	40	0.0064144507	53.55387	5
GACTGCA	40	0.0064144507	53.55387	7
CACTAGC	55	3.4594964E-4	51.931026	1
CCGCCCA	55	3.4594964E-4	51.931026	5
CAGAGAC	55	3.4594964E-4	51.931026	7
AGCAGAG	55	3.4594964E-4	51.931026	5
CGGATGC	60	5.314113E-4	47.603443	9