FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005577510

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005577510
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45243
Sequences flagged as poor quality0
Sequence length35-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC770.17019207391198637No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC770.17019207391198637No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA720.15914064054107818No Hit
GTCCTAGGCCTACCCGCCGCAGTACTGATCATTCTATTTCCCCCTCTATT650.14366863382180667No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC630.1392480604734434No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG590.13040691377671684No Hit
GCGGTAGGCCTAGCCCTACTAGTCTCAATCTCCAACACATATGGCCTAGA550.12156576707999028No Hit
GCCTAGCCCTACTAGTCTCAATCTCCAACACATATGGCCTAGACTACGTA540.11935548040580862No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT540.11935548040580862No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT520.11493490705744534No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT520.11493490705744534No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC520.11493490705744534No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAGAGTCATGTCA480.10609376036071877No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA480.10609376036071877No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC470.10388347368653714No Hit
ACCCTGGGGTTAGTATAGCTTAGTTAAACTTTCGTTTATTGCTAAAGGTT470.10388347368653714No Hit
GCCCTACTCCACTCAAGCACTATAGTTGTAGCAGGAGTCTTCTTACTCAT460.10167318701235552No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)