EGAF00005577513 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577513
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	75245
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	137	0.1820718984650143	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	130	0.17276895474782378	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	122	0.16213701907103462	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	118	0.15682105123264006	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	115	0.1528340753538441	No Hit
GTATAGGGCTGTGACTAGTATGTTGAGTCCTGTGAGTAGGAGAGTGATAT	107	0.14220213967705495	No Hit
GCCCTATACTCCCTCTACATATTTACCACAACACAATGAGGCTCACTCAC	104	0.13821516379825902	No Hit
GCCCTACTCCACTCAAGCACTATAGTTGTAGCAGGAATCTTCTTACTCAT	103	0.13688617183866036	No Hit
GGTTATAGTAGTGTGCATGGTTATTACTTTTATTTGGAGTTGCACCAAAA	90	0.119609276363878	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	89	0.11828028440427935	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	85	0.11296431656588478	No Hit
ACTATAACCACCCTAACCCTGACTTCCCTAATTCCCCCCATCCTTACCAC	85	0.11296431656588478	No Hit
GGGTTAGGATGAGTGGGAAGAAGAAAGAGAGGAAGTAAAGTTTAATTATG	84	0.11163532460628613	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	84	0.11163532460628613	No Hit
CTCTAACACTATGCTTAGGCGCTATCACCACTCTGTTCGCAGCAGTCTGC	82	0.10897734068708884	No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC	81	0.10764834872749018	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CACTGGT	10	0.007402171	142.84354	7
CACCAGC	20	2.281622E-6	142.84354	7
CAATGCA	40	1.0734002E-5	104.55702	145
CCCTGGG	25	9.926314E-4	85.70612	2
CCTGGGG	30	0.00204687	71.42177	3
GAGGGAA	30	0.00204687	71.42177	6
TCAGAGA	45	0.0022501883	69.70468	145
TCTATAA	50	0.0034166176	62.734207	145
TCTAGCA	75	4.1193925E-7	57.137417	3
TCACATC	50	2.1518402E-4	57.137413	4
CTCTAGC	90	2.2684617E-8	55.550266	2
CATGTAC	40	0.0063973693	53.566326	3
CAGCTGA	40	0.0063973693	53.566326	1
CAGCTCA	40	0.0063973693	53.566326	9
GCATGTA	40	0.0063973693	53.566326	2
GATAGCA	40	0.0063973693	53.566326	2
ACCAGCC	55	3.4455018E-4	51.943108	8
CCTAACG	65	0.009647475	48.257084	145
ATACTAT	65	0.009647475	48.257084	145
GTGACGG	65	0.009647475	48.257084	145