EGAF00005577516 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577516
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	75472
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	144	0.19079923680305277	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	102	0.1351494594021624	No Hit
ATATACAACTACGCAAAGGCCCCAACGTTGTAGGCCCCTACGGGCTACTA	100	0.13249947000212	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA	87	0.11527453890184439	No Hit
GGTTTAGGTTATGTACGTAGTCTAGGCCATATGTGTTGGAGATTGAGACT	86	0.11394954420182318	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	81	0.1073245707017172	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	80	0.10599957600169599	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	79	0.10467458130167479	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	78	0.1033495866016536	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTCTGG	10	0.007581358	141.70558	1
AGCCTTA	10	0.007581358	141.70558	6
CTGGCCA	10	0.007581358	141.70558	4
GACCATA	30	0.0021128813	70.85278	1
ACCTATG	30	0.0021128813	70.85278	7
CAGAGCG	30	0.0021128813	70.85278	9
CACTACA	50	0.0029407844	65.15	145
GTTTAGC	35	0.003892428	60.73096	1
GACAGAC	50	2.2386551E-4	56.682224	7
CATTGGG	50	2.2386551E-4	56.682224	1
ACTCTTG	50	2.2386551E-4	56.682224	8
GGACAGA	50	2.2386551E-4	56.682224	6
GGTGGCA	40	0.00660309	53.13959	9
TAAGATA	40	0.00660309	53.13959	4
CCTAGGT	55	3.584342E-4	51.529297	3
CCCAGGG	55	3.584342E-4	51.529297	2
GTAGCAC	55	3.584342E-4	51.529297	3
ATTGGGA	55	3.584342E-4	51.529297	2
TGGGACA	55	3.584342E-4	51.529297	4
CTCCTCG	60	5.505688E-4	47.23519	9