FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005577518

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005577518
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length42-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTATTTCCCCCTCTATTGATCCCCACCTCCAAATATCTCATCAACAACCG14.761904761904762No Hit
CCTCAAAGCAATACACTGAAAATGTTTAGACGGGCTCACATC14.761904761904762No Hit
CTCTAGCCTAGCCGTTTACTCAATCCTCTGATCAGGGTGAGCATCAAACT14.761904761904762No Hit
CGTATACATAAAATCTAGACAAAAAAGGAAGGAATCGAACCCCCCAAAGC14.761904761904762No Hit
GGTCTCAATCTCCTGACCTCATGATCTGCCTGCCTCAGCCTCCCAAAGTG14.761904761904762No Hit
TATTAATAATTTTCATGATTTGAGAAGGCTTTGCTTCGAAGCGAAAGTCCTAATAGTAGAAGAACTCTCC14.761904761904762No Hit
ACCTAGCCATGGCCATCCCCTTATGAGCGGGCGCAGTGATTATAGGCTTT14.761904761904762No Hit
GGTGTTGTGAGTGTAAATTAGTGCGATGAGTAGGGGAAGGGAGCCTACTA14.761904761904762No Hit
GGCTCACATCACCCCATAAACAAATAGGCTTGGTCCTAGCCTTACTATTA14.761904761904762No Hit
TGCTAGAAGTCATCAAAAAGCTATTAGTGGGAGTAGAGTTTGAAGTCCTT14.761904761904762No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG14.761904761904762No Hit
CCATAACACTTGGGGGTAGCTAAAGTGAACTGTATCCGACATCTGGTTCCTACTTCAGGGCCATAAAGCCTAAAT14.761904761904762No Hit
ATCTTCCGTCACCTGGAACAGCCTCGGAACAAGCGAGGTGATCTTGCGAA14.761904761904762No Hit
CTAATACACCAGTCTTGTAAACCGGAGATGAAAACCTTTTTCCAAGGACA14.761904761904762No Hit
CTCCGGGCCCATAACACTTGGGGGTAGCTAAAGTGAACTGTATCCGACAT14.761904761904762No Hit
GACTATTCCTAGCCATGCACTACTCACCAGACGCCTCAACCGCCTTTTCA14.761904761904762No Hit
AGTCTTTAACTCCACCATTAGCACCCAAAGCTAAGATTCTAATTTAAACT14.761904761904762No Hit
GAAATGTTGTTAGTAATGAGAAATCCTGCGAATAGGCTTCCGGCTGCCAG14.761904761904762No Hit
ACCCAACCCCCTGGTCAACCTCAACCTAGGCCTCCTATTTATTCTAGCCA14.761904761904762No Hit
ATTTCGTACATTACTGCCAGCCACCATGAATATTGTACAGTACCATAAAT14.761904761904762No Hit
GCCGGAGCACCCTATGTCGCAGTATCTGTCTTTGATTCCTGCCTCATCCC14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)