EGAF00005577522 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577522
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	111942
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTAGGCCTACCCGCCGCAGTACTGATCATTCTATTTCCCCCTCTATT	212	0.18938378803308856	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	171	0.15275767808329313	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	143	0.12774472494684747	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	136	0.12149148666273607	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	135	0.120598166907863	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	131	0.11702488788837076	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	125	0.11166496935913241	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	124	0.11077164960425934	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	124	0.11077164960425934	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	124	0.11077164960425934	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	122	0.10898501009451322	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	120	0.10719837058476712	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAGAGTCATGTCA	120	0.10719837058476712	No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC	119	0.10630505082989405	No Hit
GCCTAGGACTGTGGGGGCAATGAATGAAGCGAACAGATTTTCGTTCATTT	118	0.10541173107502098	No Hit
GGCTCACACCACCCCATAAACAAATAGGTTTGGTCCTAGCCTTTCTATTA	113	0.1009451323006557	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	25	9.960775E-4	85.65919	9
TGCGGTG	30	0.0020539605	71.38265	7
CCTCGTG	30	0.0020539605	71.38265	8
GCTGAAC	30	0.0020539605	71.38265	1
GTGCGGT	30	0.0020539605	71.38265	6
TATGCGA	70	1.5020267E-4	61.44608	145
GCTTAAC	35	0.003784021	61.185135	6
GAGGGAA	60	7.418941E-6	59.485542	6
GCGCGTA	65	1.1921144E-5	54.909737	9
AGCGCGT	65	1.1921144E-5	54.909737	8
CCTTACG	40	0.0064194263	53.536995	1
CTCGTGG	40	0.0064194263	53.536995	9
AGTGCGG	40	0.0064194263	53.536995	8
CGTAAGG	40	0.0064194263	53.536995	1
ACGAGTG	40	0.0064194263	53.536995	5
GTGCGGC	40	0.0064194263	53.536995	9
GTTATAG	40	0.0064194263	53.536995	2
AAGCGCG	70	1.8485445E-5	50.98761	7
CAGCCGG	65	0.008650728	49.629528	145
GGAGTTC	60	5.318224E-4	47.588432	8