EGAF00005577523 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577523
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	111942
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	191	0.17062407318075432	No Hit
GTCCTAGGCCTACCCGCCGCAGTACTGATCATTCTATTTCCCCCTCTATT	189	0.1688374336710082	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	151	0.13489128298583195	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	147	0.13131800396633972	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	142	0.1268514051919744	No Hit
GCCTAGGACTGTGGGGGCAATGAATGAAGCGAACAGATTTTCGTTCATTT	138	0.12327812617248218	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	134	0.11970484715298993	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	125	0.11166496935913241	No Hit
GTATAGGGCTGTGACTAGTATGTTGAGTCCTGTAAGTAGGAGAGTGATAT	122	0.10898501009451322	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	121	0.10809169033964017	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	120	0.10719837058476712	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	119	0.10630505082989405	No Hit
GGCTCACACCACCCCATAAACAAATAGGTTTGGTCCTAGCCTTTCTATTA	116	0.10362509156527488	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	113	0.1009451323006557	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCATATA	10	0.0074177347	142.77425	1
CGTGCAG	50	0.0031030397	64.30591	145
GACTTGG	45	1.2838468E-4	63.455223	6
CCGCAAG	45	1.2838468E-4	63.455223	9
CCCATAG	75	4.151716E-7	57.109703	1
TCAGAGT	60	0.006386822	53.588253	145
CCAAGAG	40	0.0064178375	53.540344	3
CAAGAGC	40	0.0064178375	53.540344	4
GTTATAG	40	0.0064178375	53.540344	2
GCCATGC	70	1.8478604E-5	50.990803	1
TGCACTA	70	1.8478604E-5	50.990803	5
GCACTAC	70	1.8478604E-5	50.990803	6
ACCTAAG	90	5.281728E-4	47.634007	145
TGCGAGT	60	5.316581E-4	47.591415	8
AACCACG	65	7.887131E-4	43.93054	7
TTTATAC	65	7.887131E-4	43.93054	7
AGTACCG	65	7.887131E-4	43.93054	5
TAGTACC	65	7.887131E-4	43.93054	4
GCGAGTA	65	7.887131E-4	43.93054	9
AGTTGGT	85	5.8184647E-5	41.992424	8