EGAF00005577524 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577524
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	205873
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	342	0.16612183239181438	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	282	0.13697765127044342	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	277	0.13454896951032919	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	267	0.12969160599010068	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	261	0.1267771878779636	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	261	0.1267771878779636	No Hit
CTCCTAGCCTTACTACTAATAATTATTACATTTTGACTACCACAACTCAA	260	0.12629145152594076	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	256	0.12434850611784937	No Hit
GGCTAGGAGGGTGTCGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	254	0.12337703341380366	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	249	0.12094835165368942	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	239	0.11609098813346092	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA	231	0.11220509731727814	No Hit
ACCCTGGGGTTAGTATAGCTTAGTTAAACTTTCGTTTATTGCTAAAGGTT	212	0.10297610662884399	No Hit
ATATACAACTACGCAAAGGCCCCAACGTTGTAGGCCCCTACGGGCTACTA	208	0.1010331612207526	No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCCCAACCGA	206	0.1000616885167069	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATGGAAT	45	0.0017359186	74.482086	145
CTTCTGG	35	0.0038108695	61.094406	1
GGCGAAA	75	1.7536533E-4	59.585667	145
GAGGGAA	60	7.5067874E-6	59.39734	6
CCTGGGG	75	4.213798E-7	57.021442	3
CCCTGGG	75	4.213798E-7	57.021442	2
CAATCAG	100	1.0777734E-5	55.86157	145
CTGGCCA	40	0.0064648935	53.4576	4
CAATGCA	105	1.4388117E-5	53.20149	145
CCGTGCG	110	1.9354047E-9	51.837677	9
GACGAAG	65	0.007449596	51.56452	145
GACCATA	70	1.8703735E-5	50.912003	1
CCCTAGT	100	5.3498297E-8	49.89377	1
CGGAAAA	90	4.315275E-4	49.654724	145
TATGCGA	95	5.6337897E-4	47.04132	145
TATACCG	125	6.000846E-9	45.617157	6
TCTTTAG	125	4.0335894E-5	44.689255	145
CTACTGG	80	4.1178915E-5	44.548	9
GGCTCCC	115	1.6063132E-7	43.38588	9
TCTAGCA	185	1.8189894E-12	42.3808	3