EGAF00005577535 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577535
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	72000
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	141	0.19583333333333333	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	99	0.13749999999999998	No Hit
GGTTTAGGTTATGTACGTAGTCTAGGCCATATGTGTTGGAGATTGAGACT	84	0.11666666666666668	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	81	0.11249999999999999	No Hit
CCTCTAGCCTAGCCGTTTACTCAATCCTCTGATCAGGGTGAGCATCAAAC	78	0.10833333333333332	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	76	0.10555555555555554	No Hit
GGATTAGACTGAGCCGAATTGGTATATAGTTTAAACAAAACGAATGATTT	74	0.10277777777777779	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACCGG	30	3.9544335E-4	107.971375	145
AGAATCG	35	7.2991283E-4	92.54689	145
CTAGAGC	25	0.0010244295	85.02464	3
TAGAGCC	25	0.0010244295	85.02464	4
GCATTAC	25	0.0010244295	85.02464	6
GAGCCCA	25	0.0010244295	85.02464	6
AAGCGGG	30	0.0021123467	70.85386	7
ATCACCG	40	7.419054E-5	70.85386	5
CCAGAAG	30	0.0021123467	70.85386	3
CCGCCCC	40	7.419054E-5	70.85386	9
GGAGACG	45	1.329137E-4	62.98121	5
GACGTAT	45	1.329137E-4	62.98121	8
GTATGGA	45	1.329137E-4	62.98121	1
ACGTATC	45	1.329137E-4	62.98121	9
TGAAGTT	35	0.0038914476	60.73188	4
ACTGATC	35	0.0038914476	60.73188	3
AGAAGCG	35	0.0038914476	60.73188	5
TACTGAT	35	0.0038914476	60.73188	2
ATTACTT	40	0.0066014323	53.140396	8
TCCTATA	40	0.0066014323	53.140396	2