FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005577539

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005577539
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7692
Sequences flagged as poor quality0
Sequence length35-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT120.15600624024961No Hit
ATATTATGCTTGGTTATAATTTTTCATCTTTCCCTTGCGGTACTATATCT110.14300572022880914No Hit
TCCTAATACCAACTATCTCCCTAATTGAAAACAAAATACTCAAATGGGCC100.13000520020800832No Hit
GTACTATATCTATTGCGCCAGGTTTCAATTTCTATCGCCTATACTTTATT100.13000520020800832No Hit
GTATAATACTAAGTTGAGATGATATCATTTACGGGGGAAGGCGCTTTGTG90.1170046801872075No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN90.1170046801872075No Hit
CTAATACACCAGTCTTGTAAACCGGAGATGAAAACCTTTTTCCAAGGACA90.1170046801872075No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC80.10400416016640666No Hit
TTTATATAGAGGAGACAAGTCGTAACATGGTAAGTGTACTGGAAAGTGCA80.10400416016640666No Hit
CATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAGTAGACA80.10400416016640666No Hit
GTACTGTTGAGGGTGGGTAGGTTTGTTGGTATCCTAGTGGGTGAGGGGTG80.10400416016640666No Hit
ACTATATCTATTGCGCCAGGTTTCAATTTCTATCGCCTATACTTTATTTG80.10400416016640666No Hit
ATTATACCCTAGCCAACCCCTTAAACACCCCTCCCCACATCAAGCCCGAA80.10400416016640666No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG80.10400416016640666No Hit
GGGTATAATTGTCTGGGTCGCCTAGGAGGTCTGGTGAGAATAGTGTTAAT80.10400416016640666No Hit
GTACCATAAATACTTGACCACCTGTAGTACATAAAAACCCAATCCACATC80.10400416016640666No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)