EGAF00005577543 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577543
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	83292
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	149	0.1788887288094895	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	142	0.1704845603419296	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	135	0.16208039187436968	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	133	0.1596792008836383	No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC	117	0.14046967295778706	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	117	0.14046967295778706	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	115	0.13806848196705565	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	112	0.13446669548095855	No Hit
GCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCAC	109	0.13086490899486145	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	102	0.12246074052730153	No Hit
GCCCTACTCCACTCAAGCACTATAGTTGTAGCAGGAATCTTCTTACTCAT	100	0.12005954953657014	No Hit
ACCCTGGGGTTAGTATAGCTTAGTTAAACTTTCGTTTATTGCTAAAGGTT	100	0.12005954953657014	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	97	0.11645776305047305	No Hit
GTATAGGGCTGTGACTAGTATGTTGAGTCCTGTAAGTAGGAGAGTGATAT	95	0.11405657205974162	No Hit
CTCTAACACTATGCTTAGGCGCTATCACCACTCTGTTCGCAGCAGTCTGC	94	0.11285597656437592	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATAC	10	0.0074824304	142.33835	3
ACACAAG	15	0.0076518673	141.23494	145
TCAGAGA	60	7.066028E-7	88.271835	145
CTTTGCC	30	0.0020766286	71.169174	4
CTAAGTG	65	1.11893605E-4	65.185356	145
GTTTCGT	50	0.0032464832	63.55573	145
CACCAGC	35	0.0038257325	61.002148	7
TGCCGCC	35	0.0038257325	61.002148	7
CTGTGAC	75	4.2270403E-7	56.935337	9
CCGTGCG	40	0.0064901025	53.37688	9
TATACCG	40	0.0064901025	53.37688	6
TGCTTGG	55	3.5084932E-4	51.759396	7
GCTTGGT	55	3.5084932E-4	51.759396	8
CTTGGTT	55	3.5084932E-4	51.759396	9
CCCTGGG	75	2.823141E-5	47.446114	2
CCTGGGG	80	4.1333675E-5	44.480732	3
AATCCTC	65	7.994918E-4	43.796417	5
ATCCTCT	70	0.001151352	40.6681	6
GTAGCAC	70	0.001151352	40.6681	3
CCAGGGT	90	8.279771E-5	39.538433	3