FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005577546

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005577546
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7408
Sequences flagged as poor quality0
Sequence length35-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA120.16198704103671707No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC120.16198704103671707No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN120.16198704103671707No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG100.13498920086393087No Hit
CTCTAGAGGAGCCTGTTCTGTAATCGATAAACCCCGATCAACCTCACCAC100.13498920086393087No Hit
GTTAAGGATGGGTAGGTTTGTTGATATCCTAGTGGGTGAGGGGTGGCTTT90.12149028077753779No Hit
ACTACTAACAGACCGCAACCTCAACACCACCTTCTTCGACCCCGCCGGAG90.12149028077753779No Hit
CTTATACTAGTATCCTTAATCATTTTTATTGCCACAACTAACCTCCTCGG90.12149028077753779No Hit
GTCCTTGTAGTATAAACTAATACACCAGTCTTGTAAACCGGAGATGAAAA90.12149028077753779No Hit
AGTATGAGGAGCGTTATGGAGTGGAAGTGAAATCACATGGCTAGGCCGGA90.12149028077753779No Hit
GTGATAGATTGGTCCAATTGGGTGTGAGGAGTTCAGTTATATGTTTGGGA80.10799136069114472No Hit
TCCTTGTACTATCCCTATGAGGCATAATTATAACAAGCTCCATCTGCCTA80.10799136069114472No Hit
CTATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTG80.10799136069114472No Hit
ACATAGCACATTACAGTCAAATCCCTTCTCGTCCCCATGGATGACCCCCC80.10799136069114472No Hit
ACCCTGGGGTTAGTATAGCTTAGTTAAACTTTCGTTTATTGCTAAAGGTT80.10799136069114472No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)