FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005577548

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005577548
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32
Sequences flagged as poor quality0
Sequence length49-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGTACCATAAATACTTGACCACCTGTAGTACATAAAAACCCAATCCACA26.25No Hit
GCAATACACTGAAAATGTTTAGACGGGCTCACATCACCCCATAAACAAAT13.125No Hit
GTTTTAAGAGTACTGCGGCAAGTACTATTGACCCAGCGATGGGGGCTTCG13.125No Hit
CTAAGCACCCTAATCAACTGGCTTCAATCTACTTCTCCCGCCGCCGGGAA13.125No Hit
GCTATGAAGAATAGGGCGAAGGGGCCTGCGGCGTATTCGATGTTGAAGCC13.125No Hit
CAATAAAGTGATTGGCTTAGTGGGCGAAATATTATGCTTTGTTGTTTGGA13.125No Hit
CTACTAACAGACCGCAACCTCAACACCACCTTCTTCGACCCCGCCGGAGG13.125No Hit
TCACCAGTCAAAGCGAACTACTATACTCAATTGACCCAATAACTTGACCA13.125No Hit
GACGGGTGTGCTCTTTTAGCTGTTCTTAGGTAGCTCGTCTGGTTTCGGGG13.125No Hit
CCTTAACCTCTACTTCTACCTACGCCTAATCTACTCCACCTCAATCACAC13.125No Hit
GTCCATATCAACAATAGGGTTTACGACCTCGATGTTGGATCAGGACATCC13.125No Hit
CCCATAACACTTGGGGGTAGCTAAAGTGAACTGTATCCGACATCTGGTTC13.125No Hit
GGTTAGTTGTGGCAATAAAAATGATTAAGGATACTAGTATAAGAGATCAG13.125No Hit
TTCATACACCTATCCCCCATTCTCCTCCTATCCCTCAACCCCGACATCAT13.125No Hit
GTGTGCCCCTCCTCTTGGGCACTGTAAGGAATAAACTCATCTTTCAAGGC13.125No Hit
CTACCTCCCTGACAACCGCCTATAGCACTCGAATAATTCTTCTCACCCTA13.125No Hit
ACATATAACTGAACTCCTCACACCCAATTGGACCAATCTATCACCCTATAGAAGAACTAATGTTAGTA13.125No Hit
CGTGTGAATGAGGGTTTTATGTTGTTAATGTGGTGGGTGAGTGAGCCCCA13.125No Hit
ACCCTAGACCAAACCTACGCCAAAATCCATTTCACTATCATATTCATCGG13.125No Hit
ATCCACAACCTTAACAATGAACAAGATATTCGAAAAATAGGAGGACTACT13.125No Hit
CCACCATCCTCCGTGAAATCAATATCCCGCACAAGAGTGCTACTCTCCTC13.125No Hit
GTACTATTTATACTAAAAGAGTAAGACCCTCATCAATAGATGGAGACAT13.125No Hit
CCTTTAGCAATAAACGAAAGTTTAACTAAGCTATACTAACCCCAGGGTTG13.125No Hit
GGTGATAGCTGGCTGTCCAAGATAGAATCTTAGTTCAACTTTAAATTTGCCCACAGAACCCTCTAAATCCCC13.125No Hit
CATCTACAAAATGCCAGTATCAGGCGGCGGCTTCGAAGCCAAAGTGATGT13.125No Hit
TCACAAGACGTCTTGCACTCATGAGCTGTCCCCACATTAGGCTTAAAAAC13.125No Hit
CCTCAGATAGGAGTCCCTTGACCACCATACTCTGTGAAATCAATATCCCG13.125No Hit
GTACTATGTACTGTTAAGGTTGGGTAGGTTTGTTGATATCCTAGTGGGTG13.125No Hit
TATCAATAGATGGAGACATACAGAAATAGTCAAACCACATCTACAAAATG13.125No Hit
CCCTGAAGCTTCACCGGCGCAGTCATTCTCATAATCGCCCACGGACTTAC13.125No Hit
GGGTGGGACTGTCTACTGAGTAGCCTCCTCAGATTCATTGAACTAGGTC13.125No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)