EGAF00005577552 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577552
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	81858
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	134	0.1636981113635808	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	131	0.16003322827335142	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	123	0.1502602066994063	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	117	0.14293044051894743	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	114	0.13926555742871805	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	108	0.1319357912482592	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	104	0.1270492804612866	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	95	0.11605463119059836	No Hit
GCCCTACTCCACTCAAGCACTATAGTTGTAGCAGGAATCTTCTTACTCAT	93	0.11361137579711207	No Hit
GCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCAC	89	0.1087248650101395	No Hit
GTATAGGGCTGTGACTAGTATGTTGAGTCCTGTAAGTAGGAGAGTGATAT	89	0.1087248650101395	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	86	0.10505998191991009	No Hit
TCCTAACCCTACTCCTAATCACATAACCTATTCCCCCGAGCAATCTCAAT	85	0.10383835422316694	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	84	0.1026167265264238	No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC	83	0.10139509882968066	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCCTCA	10	0.007547662	141.92421	6
CACCAGC	25	0.0010187455	85.154526	7
CCGTGCG	35	3.8019287E-5	81.09954	9
TCCGTGC	40	7.369273E-5	70.962105	8
AGCCTTA	30	0.002100641	70.9621	6
GTACCCC	35	0.003869907	60.824657	6
GTCTGGC	35	0.003869907	60.824657	7
CTAAGTC	35	0.003869907	60.824657	3
TAAGTCT	35	0.003869907	60.824657	4
AGTCTGG	35	0.003869907	60.824657	6
CTGGCCT	35	0.003869907	60.824657	9
TCTGGCC	35	0.003869907	60.824657	8
GTAAAGG	35	0.003869907	60.824657	6
AAGTCTG	35	0.003869907	60.824657	5
ATTAGAG	60	7.665021E-6	59.135082	3
GAGGCAC	60	7.665021E-6	59.135082	7
TAGTCCG	65	1.2316201E-5	54.58623	5
CCTTCTG	65	1.2316201E-5	54.58623	9
CTGACTT	40	0.006564937	53.221577	9
GGAGTTC	40	0.006564937	53.221577	8