EGAF00005577565 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577565
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	112202
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	201	0.17914119177911267	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	155	0.13814370510329582	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	141	0.12566620915848203	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	136	0.12120996060676281	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	130	0.11586246234469974	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	128	0.11407996292401205	No Hit
GTGGGTGGTTGTGTTGATTCAAATTATGTGTTTTTTGGAAAGTCATGTCA	124	0.11051496408263667	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	123	0.10962371437229282	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	113	0.10071121726885439	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCACTTA	10	0.007547968	141.94562	1
GTGGAGG	40	0.0013034935	80.02279	145
CACAGTA	40	0.0013034935	80.02279	145
TATGCGA	45	0.0020801628	71.13136	145
TAACGAG	30	0.0021014253	70.9728	5
GGTTAAC	30	0.0021014253	70.9728	2
CGAATCA	50	0.003158682	64.01823	145
AATCCAG	35	0.0038713422	60.833828	5
ATCCAGG	35	0.0038713422	60.833828	6
ACGATCA	55	0.004607395	58.198395	145
CCTTACG	40	0.0065673506	53.229603	1
GTAATCC	40	0.0065673506	53.229603	3
ACGCAGG	135	8.297457E-5	39.517426	145
TCTTTGT	110	0.0014500546	38.79893	145
TGGGCGG	75	0.001640724	37.85216	9
GTTATAG	75	0.001640724	37.85216	2
ATTAGAG	140	7.7261575E-7	35.4864	3
GAGGCAC	140	7.7261575E-7	35.4864	7
GTGGCCA	85	0.0030321416	33.398968	4
CTGAGAC	110	2.7448754E-4	32.260365	9