EGAF00005577571 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577571
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	118206
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	206	0.174272033568516	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	150	0.12689711182173494	No Hit
CCTCTAGCATCACCAGTATTAGAGGCACCGCCTGCCCAGTGACACATGTT	144	0.12182122734886554	No Hit
GTTGTAGTCCGTGCGAGAATAATGATGTATGCTTTGTTTCTGTTGAGTGT	138	0.11674534287599615	No Hit
ACCTAAACCTACTCCAATGCTAAAACTAATCGTCCCAACAATTATATTAC	136	0.11505338138503968	No Hit
GGTTTAGGTTATGTACGTAGTCTAGGCCATATGTGTTGGAGATTGAGACT	134	0.11336141989408322	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	130	0.10997749691217028	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	130	0.10997749691217028	No Hit
GTATAGGGCTGTGACTAGTATGTTGAGTCCTGTAAGTAGGAGAGTGATAT	128	0.10828553542121382	No Hit
GGTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTC	128	0.10828553542121382	No Hit
CCCCTATACCTTCTGCATAATGAATTAACTAGAAATAACTTTGCAAGGAG	124	0.10490161243930088	No Hit
GGCCTAGACTACGTACATAACCTAAACCTACTCCAATGCTAAAACTAATC	124	0.10490161243930088	No Hit
GGCTAGGAGGGTGTTGATTATTAAAATTAAGGCGAAGTTTATTACTCTTT	122	0.1032096509483444	No Hit
CATTCATACAGGTCCCTATTTAAGGAACAAGTGATTATGCTACCTTTGCA	120	0.10151768945738794	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATGCGA	35	7.4875884E-4	92.01279	145
CAATCAG	55	4.590155E-5	78.07145	145
CTCAAGT	30	0.0020698153	71.24682	2
CCTCAAG	30	0.0020698153	71.24682	1
CTAAGTG	80	3.6230376E-6	67.09265	145
CGAATCA	65	1.050085E-4	66.06046	145
CGATTCA	70	1.5152003E-4	61.341854	145
CGCATGA	130	1.6589183E-8	57.802902	145
GTATAGC	65	1.2060407E-5	54.805244	1
AAAGGGG	60	0.0063476926	53.67412	145
CTACTGG	40	0.006468837	53.435116	9
TGTGCCA	40	0.006468837	53.435116	4
CACCAGC	40	0.006468837	53.435116	7
GTACATG	65	0.008710705	49.545345	145
CCACGAC	100	3.0593692E-6	42.748093	9
ACCACGA	105	4.278618E-6	40.712467	8
GCATTAT	75	0.0016102926	37.998306	1
AAGTCCG	115	0.0017513657	37.338516	145
CTTATGC	80	0.0022106525	35.62341	3
TGTAAGG	120	1.0697622E-5	35.62341	2