EGAF00005577575 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005577575
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	42492
Sequences flagged as poor quality	0
Sequence length	35-151
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	92	0.2165113433116822	No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT	79	0.18591734914807492	No Hit
TCCTTGTACTATCCCTATGAGGCATAATTATAACAAGCTCCATCTGCCTG	56	0.1317895133201544	No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG	56	0.1317895133201544	No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA	53	0.12472936082086039	No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC	53	0.12472936082086039	No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG	53	0.12472936082086039	No Hit
GTATAGGGCTGTGACTAGTATGTTGAGTCCTGTAAGTAGGAGAGTGATAT	47	0.11060905582227243	No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA	46	0.1082556716558411	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGTAGT	15	0.005567835	156.89307	145
GGGCTTA	10	0.00931103	132.22261	1
CCCAGGG	20	5.542379E-4	99.16696	9
CCCCAGG	20	5.542379E-4	99.16696	8
GTTGACA	40	8.762075E-4	88.25236	145
GTACAAG	45	2.0983298E-6	73.45701	1
TATACCG	40	1.0405963E-4	66.111305	6
CAAGGAA	40	1.0405963E-4	66.111305	4
TTGTACA	45	1.8634934E-4	58.76561	4
GTACAGT	45	1.8634934E-4	58.76561	6
TGTACAG	45	1.8634934E-4	58.76561	5
GTCATAA	110	1.3595891E-5	53.48628	145
AGGAAGG	50	3.1361636E-4	52.88905	6
ATTGTAC	50	3.1361636E-4	52.88905	3
GCGAAAT	50	0.008236277	50.18942	140-144
ACAAGGA	80	1.0847998E-6	49.58348	3
CCTATAT	55	5.0193333E-4	48.08095	2
TACAGTA	55	5.0193333E-4	48.08095	7
CAGTACC	55	5.0193333E-4	48.08095	9
TACCGCC	55	5.0193333E-4	48.08095	8