EGAF00005578371 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005578371
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2124741
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGGACTCCTATCTCGTATGCCGT	11659	0.5487257035092747	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	4062	0.19117624218669477	No Hit
CTGTTAGCCTGTTGACAATAGTAAGTTGCAAAATCTTCAGGCTGCAGGCTGCTGATGGTGAGAGTGAAATCTGTC	3508	0.16510247601943012	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	3284	0.1545600146088394	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGGACTCCTATCTCGTATGCC	3040	0.14307626200087445	No Hit
GGCTAACAGTTTCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATGAAACGAACTGTGGCTGCACCAT	2899	0.13644015905938653	No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC	2848	0.1340398665060824	No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC	2712	0.127639086363938	No Hit
GTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAA	2653	0.1248622773316842	No Hit
CAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATG	2583	0.12156775814087459	No Hit
CTTTTGGCCAGGGGACCAAGCTGGAGATGAAACGAACTGTGGCTGCACCA	2535	0.11930865926717657	No Hit
GGATGGGAGGGGGTCAGGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCCCTGTTGAAG	2517	0.1184614971895398	No Hit
GGATATTAGGAACTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCCATGGTGCATC	2498	0.11756727055203434	No Hit
GTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAG	2421	0.11394329944214376	No Hit
GTCTTCATCTTCCCGCCATCTGATGAGCAGTTGAAATCTGGAACTGCCTCTGTTGTGTGCCTGCTGAATAACTT	2192	0.10316551523220949	No Hit
GTCCTGCTCTGTGACACTCTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCT	2145	0.10095348091838016	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGGGGG	2105	45.47387	69
AGGGGGG	3465	40.50604	70
AAGTACG	190	39.63172	1
CTCGTAT	2335	35.05356	39
TCGTATG	2385	34.90377	40
GCCGTCT	2460	34.4228	46
CGTATGC	2435	34.221416	41
TGCCGTC	2490	34.03876	45
CTTATAC	2445	34.01133	1
TATCTCG	2410	33.772167	36
ATCTCGT	2400	33.64424	37
ATGCCGT	2510	33.624622	44
CCGTCTT	2575	33.142574	47
GTATCAA	9015	32.90267	1
GACGGAC	2445	32.902317	26
TATACAC	2530	32.86169	3
AAAGGGG	2700	32.4645	68
CTTGAAA	2800	31.906836	57
CGAGACG	2525	31.85603	23
TTATACA	2605	31.66651	2