EGAF00005578389 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005578389
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3196048
Sequences flagged as poor quality	0
Sequence length	20-76
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGT	20563	0.6433883345932226	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTTTGGCCTCTCTGGGATAGAAGTTATT	5725	0.17912747242844915	No Hit
CTGTTAGCCTGTTGACAATAGTAAGTTGCAAAATCTTCAGGCTGCAGGCTGCTGATGGTGAGAGTGAAATCTGTC	5518	0.17265072364369996	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	4647	0.14539831692139793	No Hit
GGCTAACAGTTTCCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGATGAAACGAACTGTGGCTGCACCAT	4207	0.13163131467362194	No Hit
CAACAGAGGCAGTTCCAGATTTCAACTGCTCATCAGATGGCGGGAAGATG	4047	0.126625132038067	No Hit
GGCGTAGACTTTGTGTTTCTCGTAGTCTGCTTTGCTCAGCGTCAGGGTGC	4003	0.1252484318132894	No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC	3955	0.12374657702262294	No Hit
CTTTTGGCCAGGGGACCAAGCTGGAGATGAAACGAACTGTGGCTGCACCA	3644	0.11401580952476308	No Hit
GTCTACGCCTGCGAAGTCACCCATCAGGGCCTGAGCTCGCCCGTCACAAA	3613	0.11304586163912432	No Hit
AGTCAGGACACAGCATGGACATGAGGGTCCCCGCTCAGCTCCTGGGGCTC	3592	0.11238880016820774	No Hit
GGATATTAGGAACTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAAGCCCCTAAGCTCCTGATCCATGGTGCATC	3434	0.10744519481559728	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCC	3390	0.10606849459081967	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	3364	0.10525498991254198	No Hit
GTACAGTGGAAGGTGGATAACGCCCTCCAATCGGGTAACTCCCAGGAGAG	3265	0.1021574144067924	No Hit
GGATGGGAGGGGGTCAGGCTGGAACTGAGGAGCAGGTGGGGGCACTTCTCCCTCTAACACTCTCCCCTGTTGAAG	3241	0.10140648701145916	No Hit
GGCCAAAAGTGTACGGGAAACTGTTAGCCTGTTGACAATAGTAAGTTGCA	3221	0.1007807141820148	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGGGGG	3495	49.892017	69
AGGGGGG	5895	43.62149	70
CTTATAC	3560	40.877487	1
TATACAC	3660	40.300888	3
GTATCAA	7655	39.016586	1
TTATACA	3770	38.686	2
TCGTATG	4035	37.803696	40
CGTATGC	4090	37.25148	41
AAAGGGG	4255	37.18199	68
CTCGTAT	3950	36.986637	39
GCCGTCT	4200	36.892284	46
CCGTCTT	4235	36.6956	47
TGCCGTC	4235	36.47497	45
ATGCCGT	4250	36.302414	44
ATCTCGT	3965	35.888252	37
ACGAGAC	4200	35.006416	22
TACACAT	4315	34.797905	5
TATGCCG	4415	34.752388	43
TATCAAC	8690	34.52004	2
CACGAGA	4270	34.49838	21