FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005579055

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005579055
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences114131618
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCAATTCAGACCAATA3029980.2654812095978522No Hit
TAGCCCTCAGCGTGAA2492840.21841800227523278No Hit
ATCCAGAGTACGGTTT1779540.15591998354040681No Hit
TATCGAGAGTAGTCGG1755380.15380312929586262No Hit
CCGTAGGGTAACTGAA1736030.15210771830116349No Hit
CCACGTTAGTGTCGGA1630860.14289291859509082No Hit
TTTGGTTCAGCGTGAA1618190.14178279677065475No Hit
TTGTCTAAGGGTTCCC1559630.1366518785355343No Hit
GGCGTTGGTTGCAGAG1504390.13181185252276018No Hit
TCACCTGCATCACAAC1441270.12628139557260984No Hit
ATTCGTTTCGGTTGTA1405060.12310874274997134No Hit
GCGCATGTCTTTCGAT1391300.12190311715374086No Hit
TTACGTTCAGAACGAC1324780.11607475853010338No Hit
CTCTCGAAGAGACTCG1276960.11188485911064538No Hit
TCGCCTAGTATCTAGC1239260.10858165526050809No Hit
GGTACCGGTAGGGTCA1238130.10848264676314323No Hit
GGAGTAGTCTATCTCA1218890.10679687376376282No Hit
GAGACTTAGGTCCTCG1202610.10537045045659478No Hit
TAGACTGAGGAGGCGA1187950.10408596853502944No Hit
GCCAGCATCCCAGTAA1153590.10107540927002366No Hit
ATATTCCCACGTTACA1151780.10091682043796137No Hit
TCGAGCGGTTCTTTGT1148780.10065396602017856No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)