FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005579059

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005579059
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences111086157
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGGTCCTCACCACAA4785850.4308232573028879No Hit
GCAACCGCATTACCTT2735710.24626920886281087No Hit
TCCCACATCTGAGTAC2334820.21018100392112765No Hit
GAAGTGGAGAGCTACG2189970.19714157543500224No Hit
CAGGGCTAGCTTCAAC2152960.19380992719011783No Hit
TTAGCGATCCTAGAGT2098860.18893983343037063No Hit
ACAAAGACAAGTAACA2064080.1858089302702226No Hit
CTAGCGGAGTTACACC2043580.18396351581412615No Hit
TCACCACTCGCTCGGA1998130.17987209693463424No Hit
CCTTGGTAGGAACCGT1958050.17626408662242227No Hit
CTGAATGAGAGCAGCT1948060.1753647846508904No Hit
CGCACAGAGATTACGA1947370.1753026707009047No Hit
CTCAGCTGTCAATACC1936420.17431694932069708No Hit
TCAGTCCGTAGGTAAT1916360.17251114376024368No Hit
TGTACGAGTTACCCAA1834310.16512498492498937No Hit
TGAATCGTCCATCATT1826200.1643949209621141No Hit
ATATTCCAGAACAGGA1768090.15916384613071094No Hit
CACGTTCTCGGATAAA1756610.15813041403529696No Hit
CCAATGATCTTATCAC1732920.1559978350857884No Hit
TTAGCTTGTGCTTCCT1720490.15487888378387238No Hit
AGGCCTGTCCAATCCC1693560.15245463933008324No Hit
GCGATTACAAGGCTTT1670790.1504048789805556No Hit
TTTGCGCAGCTGCTCG1661970.14961090066334728No Hit
TCACAGAAGGATTAAC1646710.14823719214627254No Hit
AAGGTTCAGGCTCAGA1613880.14528182840999712No Hit
GACTAGTAGATTACGA1586830.1428467815301235No Hit
GACCCAGAGACCCATT1560800.14050355527196787No Hit
CACTAAGGTTTCGTTT1550980.139619556737389No Hit
TTCGTTACAGGCATTT1532930.1379946918138504No Hit
GAACTTGAGCGCAATG1491200.134238148142977No Hit
GCGATTAAGATGGGAA1488480.13399329315172906No Hit
TTAGGTGGTTCCCTTG1477530.13300757177152145No Hit
TGGCCTTAGTCTTAGC1466310.13199754493262378No Hit
AAACGAATCGTCGCAG1434840.1291646086919723No Hit
ACAGACTTCTCCTTGG1428400.12858487849210593No Hit
GAACTTGTCACATTCT1407630.1267151585773194No Hit
GAAATGATCGTGGCGT1407070.1266647472555919No Hit
TTAGCGACACATAAAG1401130.12613002716441077No Hit
GATCGTATCCGGCTGA1393670.1254584763428264No Hit
TACTCGCAGGGTCTGA1375560.1238282102062456No Hit
TCGCCTAAGCAGAATT1356820.12214123133272133No Hit
ATTCGTTTCCCACTTG1347480.1213004425024803No Hit
GAGGTCCCAGCAGGTA1343570.12094846345256141No Hit
TTGCCCATCTGAGTCA1340360.12065949855480193No Hit
CGATGATTCATCGCCT1339330.12056677773091026No Hit
TAACGGTTCAGCACGC1335270.12020129564838578No Hit
TGAATCGTCATCGCCT1318990.11873576650959308No Hit
AGCTGATAGTGATAAC1302990.11729544303166416No Hit
TCAGTCCTCGTGAGTT1299100.11694526438609269No Hit
CAAAGCTGTACGGTTT1248350.11237673835453683No Hit
AAAGGATGTATACGCT1239330.11156475599385439No Hit
AACCTTTAGCGTATCT1233630.11105164075484221No Hit
CGTACAAAGGGAAGCG1230350.11075637444186677No Hit
GCTTGCTCAAGCGACA1229700.11069786130057592No Hit
ACTGCAAGTCTCTGGG1227410.11049171500279734No Hit
CTCACCAAGAGGCCTA1220940.10990928419640981No Hit
GGAGGATGTAGCGTTT1218410.1096815330464623No Hit
GCGGTGTGTCCACCAG1217130.10956630716822799No Hit
GAGGCTCAGACGAAAG1209490.10887855270751692No Hit
TAAGTGCAGAACTAAC1193510.1074400296339354No Hit
TGGAAGGAGAGAGGTA1191090.10722218070789864No Hit
TTACCCGTCGCAGATT1190880.10720327646225082No Hit
TGTACAGAGAAGAGTG1176490.10590788553428848No Hit
CTCTCGATCCGGCGAT1173400.10562972306261346No Hit
TACTCGCTCGGGCTCA1165400.104909561323649No Hit
TGGTCCTGTACGGATG1159570.10438474345637863No Hit
GTCACCTCATCACAAC1157930.10423711029989091No Hit
GAAGAGCTCGGCAATT1154130.1038950334738828No Hit
ATGTTTCCAGGTAGGT1150610.10357816230873844No Hit
CCCTGATGTGTCCCAG1147880.10333240711531681No Hit
GAAAGTAAGATGAGGA1146260.10318657436317649No Hit
TATCTGTAGTTCAAGA1123550.10114221522669112No Hit
CCCACATAGTGTCCCG1116410.10049947087466533No Hit
AACCAACGTGCAAAGC1114700.10034553630296167No Hit
CCAGATATCCTTTGCG1113910.10027442033123893No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)