FastQCFastQC Report
Sun 5 Jun 2022
EGAF00005579062

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005579062
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences128249853
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCAATTCAGACCAATA3579940.27913794177994106No Hit
TAGCCCTCAGCGTGAA2946040.22971098454202515No Hit
ATCCAGAGTACGGTTT2123920.1656079870906363No Hit
CCGTAGGGTAACTGAA2067810.1612329333430113No Hit
TATCGAGAGTAGTCGG2031140.1583736708064687No Hit
CCACGTTAGTGTCGGA1933940.15079471475105705No Hit
TTTGGTTCAGCGTGAA1908300.14879549218664603No Hit
GGCGTTGGTTGCAGAG1772210.13818417398108052No Hit
TTGTCTAAGGGTTCCC1729830.13487968676268192No Hit
TCACCTGCATCACAAC1704750.1329241289656683No Hit
GCGCATGTCTTTCGAT1698040.13240093148488832No Hit
ATTCGTTTCGGTTGTA1653700.12894361758059872No Hit
TTACGTTCAGAACGAC1519740.11849838143674131No Hit
CTCTCGAAGAGACTCG1508130.1175931172412338No Hit
GGAGTAGTCTATCTCA1441690.11241260448072404No Hit
TCGCCTAGTATCTAGC1436120.11197829599071743No Hit
GAGACTTAGGTCCTCG1404310.10949798125694538No Hit
TAGACTGAGGAGGCGA1396710.10890538798512307No Hit
GCCAGCATCCCAGTAA1369440.10677906975846592No Hit
ATATTCCCACGTTACA1355850.10571941942108894No Hit
TCGAGCGGTTCTTTGT1351640.10539115393761894No Hit
ACCAAACAGGTACATA1336160.1041841350102756No Hit
ATGTCGATCTTACGGA1308490.10202662766404887No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)