FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005579063

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005579063
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences210826827
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TACGGATCACCGATCG3595100.17052383945426453No Hit
CCCTGATTCCCTAAAG3288990.15600433999796431No Hit
TCAAGGTTCGTTCCGT3146100.14922673953633045No Hit
GATGGCCAGGTACTCT3130090.14846734851253063No Hit
CTTAATCTCCTTTGCG3113740.14769183050883747No Hit
CCTTAATCAAACCCTA3080610.14612039861511553No Hit
GCACCTTCACGGTTAT2976760.14119455490358446No Hit
ATAGGCTGTGCGCTCA2896680.13739617681577115No Hit
TAGCATGGTCCCGAGT2851520.13525413442758877No Hit
ATCGAGTTCGGTAGGA2841340.13477127367666544No Hit
GGAGGATGTATGTTCG2839410.134679729349624No Hit
ACAAACCTCCGTCAAA2772440.13150318863357935No Hit
GGGTGTCAGCACCATT2719060.1289712527903292No Hit
TAACGGTTCGAACCGC2718660.12895227987280766No Hit
TGCTCGTTCCAGGTAT2709020.12849503256053843No Hit
ACTACGATCTTTGCAT2591810.12293549340378775No Hit
GGGTCTGGTGCGTCCA2582510.12249437307141184No Hit
GGCACGTGTACGGAGT2561690.12150683271441541No Hit
CAAAGCTAGCACGTAG2470990.11720472366640512No Hit
GGTACCGAGCCGCAAA2411310.11437396437219065No Hit
CATTGGAAGAGACTCG2395220.11361077876488651No Hit
ACTTCCGCATGGTAAA2354500.11167933576119322No Hit
GCTTGCTGTACCTATG2344290.1111950520414558No Hit
GGGCCATGTTTCGATG2332890.11065432389209177No Hit
TTCATTGGTTGGCTAT2314180.10976686567502152No Hit
GAGTGAGGTGATTCCA2302530.10921427945220652No Hit
TCAAGACAGTCAACTC2261240.10725580004104507No Hit
TTGCCCACAATTGCCA2252570.10684456205376557No Hit
GCTTGCTTCTCCAACC2245600.10651395896595266No Hit
ATGTCTTTCCATATCT2240940.10629292447682666No Hit
AGCCCGAAGCATTCCA2165360.10270799171113076No Hit
TTTGAGGGTTTGCCAA2160820.10249264909726125No Hit
CACTGAACATTGAACC2158460.1023807088838841No Hit
TTGTTCATCTGGAAGG2131510.10110240856587004No Hit
AAACGAATCACCCGGA2119280.1005223116126488No Hit
TGCTCACAGATGCGAC2114430.10029226498770008No Hit
CACATGAGTCACAGTT2109390.1000532062269286No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)