FastQCFastQC Report
Wed 11 May 2022
EGAF00005579071

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005579071
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences129132175
Sequences flagged as poor quality0
Sequence length16
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCAATTCAGACCAATA3499510.2710021727737491No Hit
TAGCCCTCAGCGTGAA2869900.22224515307668288No Hit
ATCCAGAGTACGGTTT2052920.15897819424167525No Hit
TATCGAGAGTAGTCGG2021360.15653418677413278No Hit
CCGTAGGGTAACTGAA2014070.15596964892754264No Hit
CCACGTTAGTGTCGGA1880050.14559113559420803No Hit
TTTGGTTCAGCGTGAA1862480.1442305141998886No Hit
TTGTCTAAGGGTTCCC1779740.13782312580114134No Hit
GGCGTTGGTTGCAGAG1717630.1330133253002205No Hit
TCACCTGCATCACAAC1669580.1292923316748905No Hit
GCGCATGTCTTTCGAT1648970.1276962925777406No Hit
ATTCGTTTCGGTTGTA1606970.1244438111570567No Hit
TTACGTTCAGAACGAC1505580.11659216612745817No Hit
CTCTCGAAGAGACTCG1479440.11456788364325157No Hit
GGTACCGGTAGGGTCA1402870.10863830025320954No Hit
TCGCCTAGTATCTAGC1400730.10847257858082233No Hit
GGAGTAGTCTATCTCA1399730.1083951385469965No Hit
GAGACTTAGGTCCTCG1365480.10574281738846264No Hit
TAGACTGAGGAGGCGA1354850.10491962982889431No Hit
GCCAGCATCCCAGTAA1338740.10367207088396056No Hit
ATATTCCCACGTTACA1318850.10213178861116527No Hit
TCGAGCGGTTCTTTGT1310160.10145883471721899No Hit
ACCAAACAGGTACATA1296200.10037777184501073No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)