FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005579095

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005579095
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences157160703
Sequences flagged as poor quality0
Sequence length151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGCAGTGGTATCAACGCAGAGTACATGGGGAGGCATTGAGGCAGCCAGC2735160.17403587205893323Clontech SMARTer II A Oligonucleotide (100% over 25bp)
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1632340.1038643865063393No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)