FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005686702

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005686702
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5786229
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAACGCA11200.07.416764312-13
ATCAACG10252.1276719E-85.788294310-11
TCAACGC9651.3379595E-65.410779512-13
Produced by FastQC (version 0.11.5)