FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005686880

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005686880
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6212979
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAACGCA11500.07.01746412-13
TCAACGC8602.156412E-86.347877512-13
ATCAACG10705.4134944E-85.54537510-11
GTATCAA23851.8180799E-85.3738259
Produced by FastQC (version 0.11.5)